../../tmp/servers/virsirnadb/951198719
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2027 | 1 | gatgcagcttccagtggtg | 19 | |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 728 | ................... | 746 | 100 |
| DQ473505.1 | Human rhinovirus 36, complete genome | 719 | ...........a....... | 737 | 94 |
| FJ445150.1 | Human rhinovirus 68 strain ATCC VR-1178, complete genome | 725 | ...........t....... | 743 | 94 |
| FJ445142.1 | Human rhinovirus 58 strain ATCC VR-1168, complete genome | 721 | ...........a....s.. | 739 | 89 |
| FJ445121.1 | Human rhinovirus 21 strain ATCC VR-1131, complete genome | 717 | .....c..c.......... | 735 | 89 |
| FJ445133.1 | Human rhinovirus 47 strain ATCC VR-1157, complete genome | 715 | .....g..c.......... | 733 | 89 |
| FJ445156.1 | Human rhinovirus 80 strain ATCC VR-1190, complete genome | 1524 | __....a..........__ | 1510 | 73 |
| FJ445153.1 | Human rhinovirus 72 strain ATCC VR-1182, complete genome | 924 | __.........tt...t.. | 908 | 73 |
| FJ445153.1 | Human rhinovirus 72 strain ATCC VR-1182, complete genome | 507 | _________.......... | 516 | 52 |
| DQ473498.1 | Human rhinovirus 10, complete genome | 2427 | .........gag.c...._ | 2444 | 73 |
| DQ473501.1 | Human rhinovirus 34, complete genome | 2412 | .........gag.c...._ | 2429 | 73 |
| FJ445178.1 | Human rhinovirus 10 strain ATCC VR-1120, complete genome | 2427 | .........gag.c...._ | 2444 | 73 |
| FJ445189.1 | Human rhinovirus 34 strain ATCC VR-1144, complete genome | 2412 | .........gag.c...._ | 2429 | 73 |
| DQ473490.1 | Human rhinovirus 4, complete genome | 156 | ___..ca.a.......... | 171 | 68 |
| FJ445169.1 | Human rhinovirus 92 strain ATCC VR-1293, complete genome | 920 | ___.........t.c.t.. | 905 | 68 |
| FJ445169.1 | Human rhinovirus 92 strain ATCC VR-1293, complete genome | 161 | _______.a.......... | 172 | 57 |
| FJ445172.1 | Human rhinovirus 97 strain ATCC VR-1297, complete genome | 918 | ___.........t.a.t.. | 903 | 68 |
| FJ445172.1 | Human rhinovirus 97 strain ATCC VR-1297, complete genome | 160 | _______.a.......... | 171 | 57 |
| DQ473485.1 | Human rhinovirus 3, complete genome | 157 | _______.a.......... | 168 | 57 |
| DQ473486.1 | Human rhinovirus 6, complete genome | 158 | _______.a.......... | 169 | 57 |
| EF173421.1 | Human rhinovirus 27, complete genome | 161 | _______.a.......... | 172 | 57 |
| EF173422.1 | Human rhinovirus 3, complete genome | 157 | _______.a.......... | 168 | 57 |
| EF173423.1 | Human rhinovirus 37, complete genome | 159 | _______.a.......... | 170 | 57 |
| EF173425.1 | Human rhinovirus 93, complete genome | 160 | _______.a.......... | 171 | 57 |
| EF173425.1 | Human rhinovirus 93, complete genome | 4218 | ______..........___ | 4209 | 52 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 157 | _______.a.......... | 168 | 57 |
| FJ445186.1 | Human rhinovirus 27 strain ATCC VR-1137, complete genome | 161 | _______.a.......... | 172 | 57 |
| GU219984.1 | Human rhinovirus C strain HRV-C15 isolate W10, complete genome | 1055 | ___..........______ | 1046 | 52 |
| DQ473499.1 | Human rhinovirus 44, complete genome | 1954 | _____..........____ | 1945 | 52 |
| FJ445125.1 | Human rhinovirus 29 strain ATCC VR-1139, complete genome | 1954 | _____..........____ | 1945 | 52 |
| FJ445175.1 | Human rhinovirus 100 strain ATCC VR-1300, complete genome | 1950 | _____..........____ | 1941 | 52 |
| FJ445174.1 | Human rhinovirus 99 strain ATCC VR-1299, complete genome | 159 | _..a.ca.a........._ | 175 | 68 |
| DQ473494.1 | Human rhinovirus 74, complete genome | 2420 | .........gaa.c...__ | 2436 | 68 |
| DQ473502.1 | Human rhinovirus 76, complete genome | 2429 | .........gag.c...__ | 2445 | 68 |
| DQ473510.1 | Human rhinovirus 75, complete genome | 2427 | .........gaa.c...__ | 2443 | 68 |
| FJ445128.1 | Human rhinovirus 33 strain ATCC VR-330, complete genome | 2429 | .........gag.c...__ | 2445 | 68 |
| FJ445131.1 | Human rhinovirus 43 strain ATCC VR-1153, complete genome | 2423 | .........gaa.c...__ | 2439 | 68 |
| FJ445132.1 | Human rhinovirus 45 strain ATCC VR-1155, complete genome | 2419 | .........gaa.c...__ | 2435 | 68 |
| FJ445135.1 | Human rhinovirus 50 strain ATCC VR-517, complete genome | 2411 | .........gaa.c...__ | 2427 | 68 |
| FJ445141.1 | Human rhinovirus 57 isolate fs ship#1-hrv-57, complete genome | 2424 | .........gag.c...__ | 2440 | 68 |
| FJ445157.1 | Human rhinovirus 81 strain ATCC VR-1191, complete genome | 2424 | .........gaa.c...__ | 2440 | 68 |
| FJ445159.1 | Human rhinovirus 81 isolate F07, complete genome | 2424 | .........gaa.c...__ | 2440 | 68 |
| FJ445182.1 | Human rhinovirus 76 strain ATCC VR-1186, complete genome | 2428 | .........gag.c...__ | 2444 | 68 |